donor.m: donor.m

In dianalow/SPLINTER: Splice Interpreter of Transcripts

donor.m

Description

Donor site mammalian frequency matrices for GT-AG pairs from SpliceDB

Usage

data("donor.m")

Format

The format is: num [1:4, 1:9] 34.1 36.2 18.3 11.4 60.4 ... - attr(*, "dimnames")=List of 2 ..$ : chr [1:4] "A" "C" "G" "T" ..$ : chr [1:9] "V1" "V2" "V3" "V4" ...

Source

http://www.softberry.com/spldb/SpliceDB.html

References

Burset M., Seledtsov I., Solovyev V. (Nucl.Acids Res.,2000,28,4364-4375; Nucl. Acids Res.,2001,29,255-259)

Examples

data(donor.m)

dianalow/SPLINTER documentation built on March 28, 2024, 2:07 p.m.