removeRegion: removeRegion
In dianalow/SPLINTER: Splice Interpreter of Transcripts
View source: R/main_splinter.R
removeRegion R Documentation
removeRegion
Description
removes a region (exon) from a GRanges or GRangesList
Usage
removeRegion(subject, roi)
Arguments
subject
GRanges or GrangesList object
roi
makeROI object containing GRanges range (to remove)
Value
GRanges object
Author(s)
Diana Low
# Removes the exon defined in roi GRanges object from a GRanges/GRangesList
compatible_cds$hits[[1]]
region_minus_exon<-removeRegion(compatible_cds$hits[[1]],roi)
dianalow/SPLINTER documentation built on March 28, 2024, 2:07 p.m.
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View source: R/main_splinter.R
| removeRegion | R Documentation |
removeRegion
Description
removes a region (exon) from a GRanges or GRangesList
Usage
removeRegion(subject, roi)
Arguments
subject |
GRanges or GrangesList object |
roi |
|
Value
GRanges object
Author(s)
Diana Low
# Removes the exon defined in roi GRanges object from a GRanges/GRangesList compatible_cds$hits[[1]] region_minus_exon<-removeRegion(compatible_cds$hits[[1]],roi)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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