plotDegMatrix: Returns the image object to show the heat map of degrees...
In dicook/phyViz: Phylogenetic Visualization

Description Usage Arguments See Also Examples

Returns the image object to show the heat map of degrees between the inputted set of vertices

1 2	plotDegMatrix(varieties, ig, tree, xLab = "Variety", yLab = "Variety", legendLab = "Degree")

`varieties`	subset of varieties used to generate the heat map
`ig`	the graph representation of the data tree (in igraph format)
`tree`	the data tree (in data frame format)
`xLab`	string label on the x axis (default is "Variety")
`yLab`	string label on the y axis (default is "Variety")
`legendLab`	string label on the legend (default is "Degree")

http://www.r-project.org for iGraph information

data(sbTree)
ig = treeToIG(sbTree)
varieties=c("Bedford", "Calland", "Narow", "Pella", "Tokyo", "Young", "Zane")
p = plotDegMatrix(varieties, ig, sbTree, "Soybean label", "Soybean label", "Degree")
p + ggplot2::scale_fill_continuous(low="white", high="darkgreen")