Files in dieterich-lab/CircTest
Test circRNA dependence on host genes
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/Circ.filter.R
R/Circ.linePlot.R
R/Circ.ratioplot.R
R/Circ.test.R
R/HostGeneCount.R
R/documentData.R
R/summarySE.R
README.md
data/Circ.rda
data/Coordinates.rda
data/Linear.rda
example_data/minimal/Circ.csv
example_data/minimal/Linear.csv
example_data/minimal/example.R
example_data/minimal/example_plots.pdf
example_data/with_annotation_in_count_table/Circ.csv
example_data/with_annotation_in_count_table/Linear.csv
example_data/with_annotation_in_count_table/example.R
example_data/with_annotation_in_count_table/example_pictures.pdf
example_data/with_annotation_table/Circ.csv
example_data/with_annotation_table/CircCoordinates.csv
example_data/with_annotation_table/Linear.csv
example_data/with_annotation_table/example.R
example_data/with_annotation_table/example_pictures.pdf
example_data/with_more_description_columns/Circ.csv
example_data/with_more_description_columns/Linear.csv
example_data/with_more_description_columns/example.R
example_data/with_more_description_columns/example_pictures.pdf
exec/merge_ciri.py
man/Circ.Rd
man/Circ.filter.Rd
man/Circ.lineplot.Rd
man/Circ.ratioplot.Rd
man/Circ.test.Rd
man/Coordinates.Rd
man/HostGeneCount.Rd
man/Linear.Rd
man/read_one_scanBam.Rd
man/read_scanBam.Rd
man/summarySE.Rd
merge_ciri.py
