Linear: Linear

In dieterich-lab/CircTest: Test circRNA dependence on host genes

Description

CircRNA host gene expression count table. This is come from the running result of DCC.

Format

A data frame with 153 rows and 21 variables.

Chr

Chromosomes of CircRNAs

Start

Start positions of CircRNAs

End

End positions of CircRNAs

Vrg_F_1_1

Drosophila virgin female, eclosion + 1 day, heads, replicate 1

Vrg_F_1_2

Drosophila virgin female, eclosion + 1 day, heads, replicate 2

Mat_F_1_1

Drosophila mated female, eclosion + 1 day, heads, replicate 1

Mat_F_1_2

Drosophila mated female, eclosion + 1 day, heads, replicate 2

Mat_M_1_1

Drosophila mated male, eclosion + 1 day, heads, replicate 1

Mat_M_1_2

Drosophila mated male, eclosion + 1 day, heads, replicate 2

Vrg_F_4_1

Drosophila virgin female, eclosion + 4 day, heads, replicate 1

Vrg_F_4_2

Drosophila virgin female, eclosion + 4 day, heads, replicate 2

Mat_F_4_1

Drosophila mated female, eclosion + 4 day, heads, replicate 1

Mat_F_4_2

Drosophila mated female, eclosion + 4 day, heads, replicate 2

Mat_M_4_1

Drosophila mated male, eclosion + 4 day, heads, replicate 1

Mat_M_4_2

Drosophila mated male, eclosion + 4 day, heads, replicate 2

Vrg_F_20_1

Drosophila virgin female, eclosion + 20 day, heads, replicate 1

Vrg_F_20_2

Drosophila virgin female, eclosion + 20 day, heads, replicate 2

Mat_F_20_1

Drosophila mated female, eclosion + 20 day, heads, replicate 1

Mat_F_20_2

Drosophila mated female, eclosion + 20 day, heads, replicate 2

Mat_M_20_1

Drosophila mated male, eclosion + 20 day, heads, replicate 1

Mat_M_20_2

Drosophila mated male, eclosion + 20 day, heads, replicate 2

Source

Original data from Westholm et al., 2014

dieterich-lab/CircTest documentation built on May 15, 2019, 8:29 a.m.