plotArray: Plot an array of trajectories along the profile of a...

In dkaschek/dMod: Dynamic Modeling and Parameter Estimation in ODE Models

Plot an array of trajectories along the profile of a parameter

Description

Plot an array of trajectories along the profile of a parameter

Usage

plotArray(
  par,
  profs,
  prd,
  times,
  direction = c("up", "down"),
  covtable,
  ...,
  nsimus = 4
)

Arguments

par	Character of parameter name for which the array should be generated.
profs	Lists of profiles as being returned by profile.
prd	Named list of matrices or data.frames, usually the output of a prediction function as generated by Xs.
times	Numeric vector of time points for the model prediction.
direction	Character "up" or "down" indicating the direction the value should be traced along the profile starting at the bestfit value.
covtable	Optional covariate table or condition.grid necessary if subsetting is required.
...	Further arguments for subsetting the plot.
nsimus	Number of trajectories/ simulation to be calculated.

Value

A plot object of class ggplot.

Author(s)

Svenja Kemmer, [e-mail]

Examples

## Not run: 
 plotArray("myparameter", myprofiles, g*x*p, seq(0, 250, 1), 
    "up", condition.grid, name == "ProteinA" & condition == "c1") 

## End(Not run)

dkaschek/dMod documentation built on April 23, 2024, 5:18 p.m.