plotAnnotatedUMAP: Plot a UMAP with annotated labels Used to show predicted cell...
In dkeitley/scrabbitr: Single-cell RNA-seq analysis of rabbit gastrulation
plotAnnotatedUMAP R Documentation
Plot a UMAP with annotated labels
Used to show predicted cell type annotations, where the number of factors is
large.
Description
Plot a UMAP with annotated labels
Used to show predicted cell type annotations, where the number of factors is
large.
Usage
plotAnnotatedUMAP(
sce,
colour_by = "predicted_celltype",
ncell_filt = 5,
size = 1,
label_force = 15,
text_size = 2,
line_size = 0.5,
palette = NULL
)
dkeitley/scrabbitr documentation built on Feb. 13, 2023, 4:26 p.m.
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| plotAnnotatedUMAP | R Documentation |
Plot a UMAP with annotated labels Used to show predicted cell type annotations, where the number of factors is large.
Description
Plot a UMAP with annotated labels Used to show predicted cell type annotations, where the number of factors is large.
Usage
plotAnnotatedUMAP( sce, colour_by = "predicted_celltype", ncell_filt = 5, size = 1, label_force = 15, text_size = 2, line_size = 0.5, palette = NULL )
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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