cv_fun | calculate coefficient of variance |
filter_low | filter genes with low expression values |
get_y_range | get y axis range of ggplot object. |
norm_cpm | CPM normalization |
norm_cpm_impl | CPM normalization by some genes |
norm_scater | TMM/RLE normalization by scater package |
norm_SCnorm | SCnorm normalization |
plot_group | plot PCA, TSNE |
plot_group_impl | workhorse of 'plot_PCA/TSNE()' |
plot_highest_exprs | Plot highest expressed genes |
plot_variance | plot variance of counts across samples |
read_mat | Read counts matrix |
reexports | Objects exported from other packages |
seq_y | generate equally spaced y coordinates, not hit bottom nor... |
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