norm_scater: TMM/RLE normalization by scater package

Description Usage Arguments Details Value See Also Examples

Description

TMM/RLE normalization by scater package

Usage

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norm_tmm(mat)

norm_rle(mat)

Arguments

mat

integer matrix. counts.

Details

norm_tmm() performs TMM normalization.

norm_rle() performs RLE normalization.

Value

numerical matrix. normalized counts.

See Also

Other matrix normalization: norm_SCnorm, norm_cpm

Examples

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norm_tmm(sim_mat) %>% head()

norm_rle(sim_mat) %>% head()

dongzhuoer/rexseek documentation built on Dec. 16, 2019, 3:19 a.m.