plot_highest_exprs: Plot highest expressed genes
In dongzhuoer/rexseek: Matrix Processing in the exSeek Project
Description
Usage
Arguments
Details
Examples
View source: R/matrix-process.R
Description
Plot highest expressed genes
Usage
1
plot_highest_exprs(mat, top_n = 20)
Arguments
mat
numeric matrix. counts.
top_n
integer scalar. How many genes to show. If greater that total
gene number, show all genes.
Details
Each row represents a gene. In a row, each bar represents a sample,
the x axis tells the percentage of counts accounted for across the whole
dataset. (counts of that gene in that sample / total counts of all genes in
all samples)
Genes are sorted by average expression.
Examples
1
plot_highest_exprs(sim_mat)
dongzhuoer/rexseek documentation built on Dec. 16, 2019, 3:19 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Examples
View source: R/matrix-process.R
Description
Plot highest expressed genes
Usage
1 | plot_highest_exprs(mat, top_n = 20)
|
Arguments
mat |
numeric matrix. counts. |
top_n |
integer scalar. How many genes to show. If greater that total gene number, show all genes. |
Details
Each row represents a gene. In a row, each bar represents a sample, the x axis tells the percentage of counts accounted for across the whole dataset. (counts of that gene in that sample / total counts of all genes in all samples)
Genes are sorted by average expression.
Examples
1 | plot_highest_exprs(sim_mat)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.