filter_low: filter genes with low expression values
In dongzhuoer/rexseek: Matrix Processing in the exSeek Project
Description
Usage
Arguments
Value
Examples
View source: R/matrix-process.R
Description
filter genes with low expression values
Usage
1
filter_low(mat, min_count = 2, min_sample_per_gene = 5)
Arguments
mat
integer matrix. counts.
min_count,
min_sample_per_gene integer scalar. For each gene, it must
contain at least min_count reads in at least min_sample_per_gene
samples. Otherwise, it would be dropped.
Value
integer matrix. counts.
Examples
1
filter_low(sim_mat) %>% head()
dongzhuoer/rexseek documentation built on Dec. 16, 2019, 3:19 a.m.
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Description Usage Arguments Value Examples
View source: R/matrix-process.R
Description
filter genes with low expression values
Usage
1 | filter_low(mat, min_count = 2, min_sample_per_gene = 5)
|
Arguments
mat |
integer matrix. counts. |
min_count, |
min_sample_per_gene integer scalar. For each gene, it must
contain at least |
Value
integer matrix. counts.
Examples
1 | filter_low(sim_mat) %>% head()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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