myTAI: Evolutionary Transcriptomics

View source: R/plot_distribution_expression_partialTAI.R

plot_distribution_expression_partialTAI

R Documentation

Comparing expression/partial TAI distributions across the different developmental stages

Description

plot_distribution_expression_partialTAI generates 2 plots that help to compare the distribution of the quotient of expression by partial TAI through various developmental stages, highlighting each stage with distinct colors.

Usage

plot_distribution_expression_partialTAI(
  ExpressionSet,
  stages = 1:ncol(ExpressionSet),
  xlab = "Expression / Partial TAI",
  ylab = "Density",
  main = "Density Distribution of Expression / Partial TAI by Developmental Stage"
)

Arguments

`ExpressionSet`	a standard PhyloExpressionSet or DivergenceExpressionSet object.
`stages`	a numeric vector specifying the indices of the stages to compare. Each index corresponds to a stage in the ExpressionSet.
`xlab`	label of x-axis.
`ylab`	label of y-axis.
`main`	figure title.