Man pages for duohongrui/simmethods
A collection of 40+ simulation methods for singlce-cell RNA seqencing data
| BASiCS_estimation | Estimate Parameters From Real Datasets by BASiCS |
| BASiCS_method_definition | Get Information of BASiCS |
| BASiCS_simulation | Simulate Datasets by BASiCS |
| BEARscc_estimation | Estimate Parameters From Real Datasets by BEARscc |
| BEARscc_method_definition | Get Information of BEARscc |
| BEARscc_simulation | Simulate Datasets by BEARscc |
| CancerInSilico_estimation | Estimate Parameters From Real Datasets by CancerInSilico |
| CancerInSilico_method_definition | Get Information of CancerInSilico |
| CancerInSilico_simulation | Simulate Datasets by CancerInSilico |
| data | Single-cell RNA-seq Data from GSE54695 |
| dropsim_estimation | Estimate Parameters From Real Datasets by dropsim |
| dropsim_method_definition | Get Information of dropsim |
| dropsim_simulation | Simulate Datasets by dropsim |
| dyngen_estimation | Estimate Parameters From Real Datasets by dyngen |
| dyngen_method_definition | Get Information of dyngen |
| dyngen_simulation | Simulate Datasets by dyngen |
| dyntoy_estimation | Estimate Parameters From Real Datasets by dyntoy |
| dyntoy_method_definition | Get Information of dyntoy |
| dyntoy_simulation | Simulate Datasets by dyntoy |
| ERCC_info | External ERCC information of 92 molecules. |
| ESCO_estimation | Estimate Parameters From Real Datasets by ESCO |
| ESCO_method_definition | Get Information of ESCO |
| ESCO_simulation | Simulate Datasets by ESCO |
| get_method | Get Information of Methods |
| group_condition | Group information of 160 Cells in GSE54695 |
| hierarchicell_estimation | Estimate Parameters From Real Datasets by hierarchicell |
| hierarchicell_method_definition | Get Information of hierarchicell |
| hierarchicell_simulation | Simulate Datasets by hierarchicell |
| Kersplat_estimation | Estimate Parameters From Real Datasets by Kersplat |
| Kersplat_method_definition | Get Information of Kersplat |
| Kersplat_simulation | Simulate Datasets by Kersplat |
| Lun2_estimation | Estimate Parameters From Real Datasets by Lun2 |
| Lun2_method_definition | Get Information of Lun2 |
| Lun2_simulation | Simulate Datasets by Lun2 |
| Lun_estimation | Estimate Parameters From Real Datasets by Lun |
| Lun_method_definition | Get Information of Lun |
| Lun_simulation | Simulate Datasets by Lun |
| MFA_estimation | Estimate Parameters From Real Datasets by MFA |
| MFA_method_definition | Get Information of MFA |
| MFA_simulation | Simulate Datasets by MFA |
| muscat_estimation | Estimate Parameters From Real Datasets by muscat |
| muscat_method_definition | Get Information of muscat |
| muscat_simulation | Simulate Datasets by muscat |
| phenopath_estimation | Estimate Parameters From Real Datasets by phenopath |
| phenopath_method_definition | Get Information of phenopath |
| phenopath_simulation | Simulate Datasets by phenopath |
| POWSC_estimation | Estimate Parameters From Real Datasets by POWSC |
| POWSC_method_definition | Get Information of POWSC |
| POWSC_simulation | Simulate Datasets by POWSC |
| powsimR_estimation | Estimate Parameters From Real Datasets by powsimR |
| powsimR_method_definition | Get Information of powsimR |
| powsimR_simulation | Simulate Datasets by powsimR |
| PROSSTT_estimation | Estimate Parameters From Real Datasets by PROSSTT |
| PROSSTT_method_definition | Get Information of PROSSTT |
| PROSSTT_simulation | Simulate Datasets by PROSSTT |
| scDD_estimation | Estimate Parameters From Real Datasets by scDD |
| scDD_method_definition | Get Information of scDD |
| scDD_simulation | Simulate Datasets by scDD |
| scDesign2_estimation | Estimate Parameters From Real Datasets by scDesign2 |
| scDesign2_method_definition | Get Information of scDesign2 |
| scDesign2_simulation | Simulate Datasets by scDesign2 |
| scDesign3_estimation | Estimate Parameters From Real Datasets by scDesign3 |
| scDesign3_method_definition | Get Information of scDesign3 |
| scDesign3_simulation | Simulate Datasets by scDesign3 |
| scDesign_method_definition | Get Information of scDesign |
| scDesign_simulation | Simulate Datasets by scDesign |
| scGAN_estimation | Estimate Parameters From Real Datasets by scGAN |
| scGAN_method_definition | Get Information of scGAN |
| scGAN_simulation | Simulate Datasets by scGAN |
| scMultiSim_estimation | Estimate Parameters From Real Datasets by scMultiSim |
| scMultiSim_method_definition | Get Information of scMultiSim |
| scMultiSim_simulation | Simulate Datasets by scMultiSim |
| SCRIP_estimation | Estimate Parameters From Real Datasets by SCRIP |
| SCRIP_method_definition | Get Information of SCRIP |
| SCRIP_simulation | Simulate Datasets by SCRIP |
| SimBPDD_method_definition | Get Information of SimBPDD |
| SimBPDD_simulation | Simulate Datasets by SimBPDD |
| Simple_estimation | Estimate Parameters From Real Datasets by Simple |
| Simple_method_definition | Get Information of Simple |
| Simple_simulation | Simulate Datasets by Simple |
| SparseDC_estimation | Estimate Parameters From Real Datasets by SparseDC |
| SparseDC_method_definition | Get Information of SparseDC |
| SparseDC_simulation | Simulate Datasets by SparseDC |
| SPARSim_estimation | Estimate Parameters From Real Datasets by SPARSim |
| SPARSim_method_definition | Get Information of SPARSim |
| SPARSim_simulation | Simulate Datasets by SPARSim |
| Splat_estimation | Estimate Parameters From Real Datasets by Splat |
| Splat_method_definition | Get Information of Splat |
| SplatPop_estimation | Estimate Parameters From Real Datasets by SplatPop |
| SplatPop_method_definition | Get Information of SplatPop |
| SplatPop_simulation | Simulate Datasets by SplatPop |
| Splat_simulation | Simulate Datasets by Splat |
| SPsimSeq_method_definition | Get Information of SPsimSeq |
| SPsimSeq_simulation | Simulate Datasets by SPsimSeq |
| SRTsim_estimation | Estimate Parameters From Real Datasets by SRTsim |
| SRTsim_method_definition | Get Information of SRTsim |
| SRTsim_simulation | Simulate Datasets by SRTsim |
| SymSim_estimation | Estimate Parameters From Real Datasets by SymSim |
| SymSim_method_definition | Get Information of SymSim |
| SymSim_simulation | Simulate Datasets by SymSim |
| TedSim_est | Bundled TedSim Estimation Function |
| TedSim_estimation | Estimate Parameters From Real Datasets by TedSim |
| TedSim_method_definition | Get Information of TedSim |
| TedSim_simulation | Simulate Datasets by TedSim |
| VeloSim_estimation | Estimate Parameters From Real Datasets by VeloSim |
| VeloSim_method_definition | Get Information of VeloSim |
| VeloSim_simulation | Simulate Datasets by VeloSim |
| zinbwave_estimation | Estimate Parameters From Real Datasets by zinbwave |
| zinbwave_method_definition | Get Information of zinbwave |
| zinbwave_simulation | Simulate Datasets by zinbwave |
| zinbwaveZinger_estimation | Estimate Parameters From Real Datasets by zinbwaveZinger |
| zinbwaveZinger_method_definition | Get Information of zinbwaveZinger |
| zinbwaveZinger_simulation | Simulate Datasets by zinbwaveZinger |
| zingeR_estimation | Estimate Parameters From Real Datasets by zingeR |
| zingeR_method_definition | Get Information of zingeR |
| zingeR_simulation | Simulate Datasets by zingeR |
