normalization_simutils: FPKM or TPM Normalization Method in simutils
In duohongrui/simutils: Common functions used in data simulation and evaluation
View source: R/normalization.R
normalization_simutils R Documentation
FPKM or TPM Normalization Method in simutils
Description
FPKM or TPM Normalization Method in simutils
Usage
normalization_simutils(
data,
norm_method = "FPKM",
gene_length = NULL,
species = "human"
)
Arguments
data
A matrix with cells on columns and genes on rows.
norm_method
FPKM or TPM
gene_length
A numeric vector of gene lengths. If NULL, the gene length data will be imported by hs_gene_length or mm_gene_length function and users must set species parameters below.
species
human or mouse.
duohongrui/simutils documentation built on March 12, 2024, 8:40 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/normalization.R
| normalization_simutils | R Documentation |
FPKM or TPM Normalization Method in simutils
Description
FPKM or TPM Normalization Method in simutils
Usage
normalization_simutils(
data,
norm_method = "FPKM",
gene_length = NULL,
species = "human"
)
Arguments
data |
A matrix with cells on columns and genes on rows. |
norm_method |
FPKM or TPM |
gene_length |
A numeric vector of gene lengths. If NULL, the gene length data will be imported by hs_gene_length or mm_gene_length function and users must set |
species |
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.