Man pages for duytpm16/qtl2utils
Modification of QTL2 Plots
| find_max_snps | Find SNPs with Highest LOD |
| jpdf_devoff | Shut down of pdf device |
| jpeg_pdf | Allows jpeg images to be converted to pdf |
| lod_drop_rng | Find Haplotype Region with LOD scores within QTL Peak Drop |
| plot_genes2 | Plot gene locations for genomic interval |
| plot_int | Plot the additive, interactive, and difference genome scan |
| plot_int_coeffCC | Plot sex-specific allele effects |
| plot_scan2 | Plot a genome scan |
| plot_snpasso2 | Plot SNP association |
| plot_snpasso_and_genes2 | Two-panel plot with both SNP association and genes |
| scan2 | Genome scan with a single-QTL model |
| scan2blup | Calculate BLUPs of QTL effects in scan along one chromosome |
| scan2_snpasso_rng | Find region with LOD scores around the given genomic interval |
| scan2snps | Single-QTL genome scan at imputed SNPs |
