samtoolsMerge: Merge sorted bam files
In dvera/gyro: gyro: Genomic utility wrappers in R
Description
samtools.merge is a simple wrapper for samtools merge for merging sorted bam files.
Usage
1
samtoolsMerge(bamFiles, outname, threads = getOption("threads", 1L))
Arguments
bamFiles
A character vector of paths to bam files.
outname
A vector of length one specifying the concatenated file name.
threads
An integer specifying the number of BAM compression threads to use
dvera/gyro documentation built on May 15, 2019, 6:18 p.m.
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Description
samtools.merge is a simple wrapper for samtools merge for merging sorted bam files.
Usage
1 | samtoolsMerge(bamFiles, outname, threads = getOption("threads", 1L))
|
Arguments
bamFiles |
A character vector of paths to bam files. |
outname |
A vector of length one specifying the concatenated file name. |
threads |
An integer specifying the number of BAM compression threads to use |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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