Files in dvera/travis

R Utilities for Bed and BEdgRaphs

.gitignore

DESCRIPTION

Dockerfile

NAMESPACE

R/alleleSpecificHic.R R/bamCount.R R/bamParseLengths.R R/bed12ToBedpe.R R/bedBreadth.R R/bedCat.R R/bedCenters.R R/bedDivide.R

R/bedDivideMeta.R

R/bedEnds.R R/bedHist.R R/bedOverhangs.R R/bedOverlap.R R/bedParseLengths.R R/bedParseStrands.R R/bedPoissonTest.R R/bedRecenter.R R/bedRemoveChrom.R R/bedSample.R R/bedSizes.R R/bedSort.R R/bedStructures.R R/bedWords.R R/bedpeToBed12.R R/bedpeToIbed.R R/bgAcf.R R/bgCluster.R R/bgCorMatrix.R R/bgHist.R R/bgIqr.R R/bgIqrNorm.R R/bgKsTest.R R/bgLoess.R R/bgOps.R R/bgParseScores.R R/bgPlot.R R/bgPoissonTest.R R/bgQuantileNorm.R R/bgQuantiles.R R/bgRead.R R/bgReduce.R R/bgScatterGrid.R R/bgScores.R R/bgSort.R R/bgStdev.R R/bgThreshold.R R/bgUnify.R R/bgZscore.R R/bgZtest.R R/circos.R R/edger2kegg.R R/faRemoveChrom.R R/faSeqNames.R R/fastqSizes.R R/intervalBox.R R/parseAlleles.R R/rageHist.R R/sam.stats.R R/samParseGenomes.R R/samParseGenomesPaired.R R/samSortByName.R R/samSquare.R R/scatterdens.R R/sraDownload.R R/travisDeploy.R README.md junk/._findcontigs.R junk/anno.dist.R junk/bam.parseBySnp.R junk/bed.addcolor.R junk/bed.addstrand.R junk/bed.avglengths.R junk/bed.dist.R junk/bed.recenter2.R junk/bed.spacing.R junk/bed.summary.R junk/bedRescore.R junk/bg.diff.R junk/bg.discardOverlaps.R junk/bg.dist.R junk/bg.insertionPlot.R junk/bg.plot2.R junk/bg.qnorm2.R junk/bg.transform.R junk/bg.uniondiff.R junk/bgtocontigs.R junk/cfbg.make.R junk/cuffdiff.2.clusters.R junk/cuffdiff.2.matrix.R junk/cuffdiff2kegg.R junk/cuffdiff2list.R junk/cufflinks.2.counts.R junk/deindex.R junk/downloadfile.R junk/dz.2.wig.R

junk/edger_extras.txt

junk/fastq.consensus.R junk/fastq.count.R junk/fastq.forcemerge.R junk/fastq.qc.R junk/fastq.ssr.R junk/findcontigs.R junk/geosub.R junk/iseg.2.bed.R junk/isegtobed.R junk/isegtocoords.R junk/lsl.R junk/lslsr.R junk/lsltr.R junk/mat.colcors.R junk/mat.makenol.R junk/mat.plotsamplerows.R junk/matgrid.R junk/nolbg.R junk/printname.R junk/qteller.2.matrix.R junk/rage.R junk/sc.R junk/scorelist.2.mat.R junk/scrapcode.R junk/shead.R junk/stail.R junk/stdout.tsv.R junk/tophat.2.matrix.R junk/totalmem.R junk/track.compositewig.R junk/track.wig.R junk/vplot.draw.R junk/vplot.make.R junk/vplot.make.old.R junk/vplot.make.old2.R junk/vplot.rank.R man/bamCount.Rd man/bamParseLengths.Rd man/bedHist.Rd man/bedParseLengths.Rd man/bedSizes.Rd man/bedSort.Rd man/bgHist.Rd man/bgScores.Rd man/sam.stats.Rd

dvera/travis documentation built on June 5, 2019, 5:12 a.m.