Man pages for dvera/travis
R Utilities for Bed and BEdgRaphs
| bamCount | Count reads in bam files |
| bamParseLengths | Parse reads in bam files by insert size. |
| bedHist | Plot a histogram of interval sizes in bed files |
| bedParseLengths | Parse intervals in bed files by size. |
| bedSizes | Retreive interval sizes in bed files |
| bedSort | Sort beds by chromosome and position |
| bgHist | Plot a histogram of scores sizes in bedGraph files |
| bgScores | Retreive scores in bedGraph files |
| sam.stats | Get summary statistics for bam files |
