Hos: Estimate observed heterozygosity corrected for sample size...

In dyerlab/gstudio: Tools Related to the Spatial Analysis of Genetic Marker Data

Estimate observed heterozygosity corrected for sample size after Nei Returns the general observed heterozygosity parameter from the frequencies

Description

Estimate observed heterozygosity corrected for sample size after Nei

Returns the general observed heterozygosity parameter from the frequencies

Usage

Hos(x, stratum = "Population")

Arguments

x	An object of type locus
stratum	A flag indicating that you want to estimate Nei's unbiased Ho across sampling locations.

Value

The expected heterozygosity

Note

This function can be called on a single vector of data, a data.frame of loci, or a data.frame of locus objects across strata. If the estimating across stratum, the unbiased estimator should be used to average across stratum and is performed by passing the appropriate stratum= argument.

Author(s)

Rodney J. Dyer [e-mail]

Examples

data(arapat)
Hos(arapat)
loci <- c( locus( c("A","A") ), locus( c("A","A") ), locus( c("A","B") ) )
Hos( loci )

dyerlab/gstudio documentation built on Feb. 2, 2024, 8:24 p.m.