write_population: Writes data frame with genotypes and other data to a file

In dyerlab/gstudio: Tools Related to the Spatial Analysis of Genetic Marker Data

Writes data frame with genotypes and other data to a file

Description

This is a basic output file formatter for saving files necessary for saving output in textual formats.

Usage

write_population(
  df,
  file,
  mode = c("text", "genepop", "structure", "dfdist")[1],
  stratum = NULL,
  ...
)

Arguments

df	The data.frame to be written to the output.
file	The path to the file you want to write to.
mode	Which format to use for writing data to file. At present there are text Outputs all data columns with loci treated as colon separated. This is the default. genepop Saves genetic data into GENEPOP format. You must specify a stratum. structure Saves genetic data into the two-lined per individual STRUCTURE format. You must specify a stratum. dfdist Saves genetic data as a FDist, DFDist, DetSel file. You must specify the stratum.
stratum	An optional argument if using genepop or structure formats. By default, the 'text' option writes all data to file.
...	Other options to pass along (e.g., verbose=TRUE)

Value

nothing.

Author(s)

Rodney J. Dyer <[e-mail]>

dyerlab/gstudio documentation built on Jan. 17, 2025, 11:17 a.m.