parseProgenesisPeptideMeasurementCsv: Parse Progenesis Peptide Measurement Csv Export

In eahrne/SafeQuant: A Toolbox for the Analysis of Proteomics Data

Description

Parse Progenesis Peptide Measurement Csv Export

Usage

parseProgenesisPeptideMeasurementCsv(file, expDesign = expDesign,
  method = "auc",
  expressionColIndices = .getProgenesisCsvExpressionColIndices(file, method =
  method), exclusivePeptides = F)

Arguments

file	path to Progenesis Peptide Measurement csv file
expDesign	experimental design data.frame
method	auc (area under curve) or spc (spectral count)
expressionColIndices	default .getProgenesisCsvExpressionColIndices()
specificPeptides	T/F keep specific peptides only

Details

No details

Value

ExpressionSet object

Note

No note

References

NA

See Also

ExpressionSet

Examples

print("No examples")

eahrne/SafeQuant documentation built on April 8, 2021, 10:10 a.m.