Man pages for econtijoch/FEAT
FMT Efficacy Analysis Toolkit

batchFEATCommand-line FEAT function to perform analysis in batch for a...
collapse_taxonomyDefine a function that will collapse a table by shared...
filter_by_metricDefine a function that filters tables by a minimum difference...
filter_functionDefine a function to produce tables populated only by OTUs...
launchFEATLaunch shiny app to analyze FMT efficacy
metric_functionDefine a function that returns the mean or median OTU...
nonzero_fraction_getterfunction that returns a table of OTUs and the fraction of...
normalize_and_filterWithin Shiny environment, normalize OTU counts for your OTU...
normalize_and_filter_batchNnormalize OTU counts for your OTU table, and impose a...
percentMake a percentage
split_into_experimentWithin Shiny environment, split a data table into an...
split_into_experiment_batchSplit a data table into an experiment-specific table given...
sums_of_numbers_onlyDefine a function that will take a vector and return the mean...
table_reorder_firstfunction to reorder tables with a given value first
visualize_metricsFunction to produce FMT metric visualizations
visualize_metrics_batchFunction to produce FMT metric visualizations and save the...
econtijoch/FEAT documentation built on Sept. 27, 2017, 1:26 a.m.