normalize_and_filter: Within Shiny environment, normalize OTU counts for your OTU...
In econtijoch/FEAT: FMT Efficacy Analysis Toolkit
Description
Usage
Arguments
Value
Description
Within Shiny environment, normalize OTU counts for your OTU table, and impose a minimum filter
Usage
1
normalize_and_filter(biom_table, min_fraction)
Arguments
biom_table
otu table
min_fraction
minimum fraction of otus to filter on (e.g. 0.001)
Value
output OTU table with relative abundances above the provided minimum
econtijoch/FEAT documentation built on May 15, 2019, 8 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Within Shiny environment, normalize OTU counts for your OTU table, and impose a minimum filter
Usage
1 | normalize_and_filter(biom_table, min_fraction)
|
Arguments
biom_table |
otu table |
min_fraction |
minimum fraction of otus to filter on (e.g. 0.001) |
Value
output OTU table with relative abundances above the provided minimum
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.