Files in ecor/geotopOptim2
An R Plug-in to calibrate soil moisture output of the Distributed Hydrological Model GEOtop
.Rbuildignore
.gitignore
ABSTRACT.md
DESCRIPTION
LICENSE
NAMESPACE
R/aggregateVar.R
R/approxfunDataFrame.R
R/extract.geotop.map.value.R
R/geotop.execution.R
R/geotop.gof.2.R
R/geotop.lookup.table.R
R/geotop.pso.2.R
R/gof.wrapper.R
R/integratefunDataFrame.R
README.md
TODO
geotop.log
geotopOptim2.Rproj
geotop_new.log
inst/How_to_run_GEOtop_Optim.rtf
inst/PSO.out/BestParamPerIter.txt
inst/PSO.out/ConvergenceMeasures.txt
inst/PSO.out/LocalBestPerIter.txt
inst/PSO.out/Model_out.txt
inst/PSO.out/PSO_logfile.txt
inst/PSO.out/Particles.txt
inst/PSO.out/PbestPerIter.txt
inst/PSO.out/Velocities.txt
inst/examples_animation/ViewSimulation.R
inst/examples_animation/ViewSimulation.Rmd
inst/examples_animation/ViewSimulation.html
inst/examples_animation/ViewSimulation_genaralized.R
inst/examples_animation/ViewSimulation_generalized.Rmd
inst/examples_animation/ViewSimulation_generalized.html
inst/examples_script/param/param_pso_c001.csv
inst/examples_script/param/param_pso_c002.csv
inst/examples_script/param/param_pso_c003.csv
inst/examples_script/param/param_pso_cland001.csv
inst/examples_script/param/param_pso_cland002.csv
inst/examples_script/pso_example_script_vsmle2.R
inst/examples_script/psolhoat_example_script_vsmle.R
inst/examples_script/roxygenize.R
inst/geotop-simulation/B2_BeG_017/_SUCCESSFUL_RUN
inst/geotop-simulation/B2_BeG_017/geotop.inpts
inst/geotop-simulation/B2_BeG_017/geotop.log
inst/geotop-simulation/B2_BeG_017/horizon0001.txt
inst/geotop-simulation/B2_BeG_017/listpoints.txt
inst/geotop-simulation/B2_BeG_017/meteoB2_irr_0001.txt
inst/geotop-simulation/B2_BeG_017/obs/observation_cal.RData
inst/geotop-simulation/B2_BeG_017/obs/observation_uncal.RData
inst/geotop-simulation/B2_BeG_017/soil/soil0001.txt
inst/geotop-simulation/B2_BeG_017/soil/soil0001_GiacomoRADARSAT.txt
inst/geotop-simulation/B2_BeG_017/soil/soil0001_StefanoTransect.txt
inst/geotop-simulation/B2_BeG_017/tabs/basin.txt
inst/geotop-simulation/B2_BeG_017/tabs/discharge.txt
inst/geotop-simulation/B2_BeG_017/tabs/point0001.txt
inst/geotop-simulation/B2_BeG_017/tabs/psiz0001.txt
inst/geotop-simulation/B2_BeG_017/tabs/snowDepth0001.txt
inst/geotop-simulation/B2_BeG_017/tabs/snowIce0001.txt
inst/geotop-simulation/B2_BeG_017/tabs/snowLiq0001.txt
inst/geotop-simulation/B2_BeG_017/tabs/snowT0001.txt
inst/geotop-simulation/B2_BeG_017/tabs/soilTz0001.txt
inst/geotop-simulation/B2_BeG_017/tabs/thetaice0001.txt
inst/geotop-simulation/B2_BeG_017/tabs/thetaliq0001.txt
inst/geotop-simulation/B2_BeG_017/temp/meteo0001.txt
inst/geotop-simulation/B2_BeG_017/temp/meteoB2_irr_0001.txt
inst/geotop-simulation/B2_BeG_017/temp/meteoB2_irr_0001.xlsx
inst/geotop-simulation/B2_BeG_017/temp/meteoB2_noirr_0001.txt
inst/geotop-simulation/B2_BeG_017/temp/meteoB2_noirr_0001.xlsx
inst/geotop-simulation/B2_BeG_017/temp/meteoP2_0001.txt
inst/geotop-simulation/B2_BeG_017/temp/meteoP2_0001.xlsx
inst/geotop-simulation/B2_BeG_017/temp/meteoP2_SWg.txt
inst/geotop-simulation/B2_BeG_017/temp/meteoP2_irr_0001.txt
inst/geotop-simulation/B2_BeG_017/temp/meteoP2_irr_0001.xlsx
inst/geotop-simulation/B2site/_SUCCESSFUL_RUN
inst/geotop-simulation/B2site/geotop.inpts
inst/geotop-simulation/B2site/geotop.log
inst/geotop-simulation/B2site/horizon0001.txt
inst/geotop-simulation/B2site/io_it.ini
inst/geotop-simulation/B2site/listpoints.txt
inst/geotop-simulation/B2site/lookup_tbl_observation.txt
inst/geotop-simulation/B2site/meteoB2_irr_0001.txt
inst/geotop-simulation/B2site/obs/obs0001.txt
inst/geotop-simulation/B2site/roxygenize.R
inst/geotop-simulation/B2site/soil/soil0001.txt
inst/geotop-simulation/B2site/soil/soil000__1.txt
inst/geotop-simulation/B2site/tabs/basin.txt
inst/geotop-simulation/B2site/tabs/discharge.txt
inst/geotop-simulation/B2site/tabs/placeholder
inst/geotop-simulation/B2site/tabs/point0001.txt
inst/geotop-simulation/B2site/tabs/psiz0001.txt
inst/geotop-simulation/B2site/tabs/snowDepth0001.txt
inst/geotop-simulation/B2site/tabs/snowIce0001.txt
inst/geotop-simulation/B2site/tabs/snowLiq0001.txt
inst/geotop-simulation/B2site/tabs/snowT0001.txt
inst/geotop-simulation/B2site/tabs/soilTz0001.txt
inst/geotop-simulation/B2site/tabs/thetaice0001.txt
inst/geotop-simulation/B2site/tabs/thetaliq0001.txt
inst/geotop-simulation/B2site/vegetation_par0001.txt
inst/geotop-simulation/B2site_template/geotop.inpts
inst/geotop-simulation/B2site_template/horizon0001.txt
inst/geotop-simulation/B2site_template/io_it.ini
inst/geotop-simulation/B2site_template/listpoints.txt
inst/geotop-simulation/B2site_template/lookup_tbl_observation.txt
inst/geotop-simulation/B2site_template/meteoB2_irr_0001.txt
inst/geotop-simulation/B2site_template/obs/obs0001.txt
inst/geotop-simulation/B2site_template/roxygenize.R
inst/geotop-simulation/B2site_template/soil/soil0001.txt
inst/geotop-simulation/B2site_template/soil/soil000__1.txt
inst/geotop-simulation/B2site_template/tabs/placeholder
inst/geotop-simulation/B2site_template/vegetation_par0001.txt
inst/poster/my_poster/erum_poster.Rmd
inst/poster/my_poster/erum_poster.html
inst/poster/my_poster/erum_poster.png
inst/poster/my_poster/erum_poster2.Rmd
inst/poster/my_poster/my_poster.Rmd
inst/poster/my_poster/my_poster.html
inst/poster/my_poster/my_poster.png
inst/poster/my_poster/my_poster3.Rmd
inst/poster/my_poster/resources/logo.png
inst/poster/poster.R
inst/scratch/README.md
inst/scratch/anlysis.R
inst/scratch/examples-script/LH_OAT_geotop_dev/LH_OAT-Ranking.txt
inst/scratch/examples-script/LH_OAT_geotop_dev/LH_OAT-gof.txt
inst/scratch/examples-script/LH_OAT_geotop_dev/LH_OAT-logfile.txt
inst/scratch/examples-script/LH_OAT_geotop_dev/LH_OAT-out.txt
inst/scratch/examples-script/LH_OAT_geotop_dev/parallel_logfile.txt
inst/scratch/examples-script/LH_OAT_see27xx/LH_OAT-Ranking.txt
inst/scratch/examples-script/LH_OAT_see27xx/LH_OAT-gof.txt
inst/scratch/examples-script/LH_OAT_see27xx/LH_OAT-logfile.txt
inst/scratch/examples-script/LH_OAT_see27xx/LH_OAT-out.txt
inst/scratch/examples-script/LH_OAT_see27xx/parallel_logfile.txt
inst/scratch/examples-script/LH_OAT_smle_geotop_dev/LH_OAT-Ranking.txt
inst/scratch/examples-script/LH_OAT_smle_geotop_dev/LH_OAT-gof.txt
inst/scratch/examples-script/LH_OAT_smle_geotop_dev/LH_OAT-logfile.txt
inst/scratch/examples-script/LH_OAT_smle_geotop_dev/LH_OAT-out.txt
inst/scratch/examples-script/LH_OAT_smle_geotop_dev/parallel_logfile.txt
inst/scratch/examples-script/LH_OAT_smle_se27xx/LH_OAT-Ranking.txt
inst/scratch/examples-script/LH_OAT_smle_se27xx/LH_OAT-gof.txt
inst/scratch/examples-script/LH_OAT_smle_se27xx/LH_OAT-logfile.txt
inst/scratch/examples-script/LH_OAT_smle_se27xx/LH_OAT-out.txt
inst/scratch/examples-script/LH_OAT_smle_se27xx/parallel_logfile.txt
inst/scratch/examples-script/joblhoat.sh
inst/scratch/examples-script/joblhoat_mpi.sh
inst/scratch/examples-script/joblhoat_vsmle.sh
inst/scratch/examples-script/joblhoat_vsmle.sh~
inst/scratch/examples-script/outrda/lhoat.rda
inst/scratch/examples-script/outrda/lhoat_n.rda
inst/scratch/examples-script/package_graph.R
inst/scratch/examples-script/param/param_pso_c001.csv
inst/scratch/examples-script/param/param_pso_c002.csv
inst/scratch/examples-script/param/param_pso_c003.csv
inst/scratch/examples-script/param/param_pso_cland001.csv
inst/scratch/examples-script/param/param_pso_cland002.csv
inst/scratch/examples-script/pso_example_script.R
inst/scratch/examples-script/psolhoat_example_script.R
inst/scratch/examples-script/psolhoat_example_script_SEQ.R
inst/scratch/examples-script/psolhoat_example_script_v3.R
inst/scratch/examples-script/psolhoat_example_script_vsmc.R
inst/scratch/examples-script/psolhoat_example_script_vsmle.R
inst/scratch/examples-script/watch-point.R
inst/scratch/pso_example_script.R
inst/scratch/schractch.R
inst/scratch/testing/ccall001.R
inst/scratch/testing/test0.execution.R
inst/scratch/testing/test2.R
inst/scratch/testing/test3.R
inst/scratch/testing/testAA.R
man/aggregateVar.Rd
man/approxfunDataFrame.Rd
man/extract.geotop.value.fromMap.Rd
man/geotopExec.Rd
man/geotopGOF.Rd
man/geotopLookUpTable.Rd
man/geotopPSO.Rd
man/gofg.Rd
man/integratefunDataFrame.Rd
roxygenize.R
roxygenize_mac.R
vignettes.R
vignettes/Calibration.R
vignettes/Calibration.Rmd
vignettes/Calibration.html
vignettes/PSO.out/BestParamPerIter.txt
vignettes/PSO.out/BestParamPerParticle.txt
vignettes/PSO.out/BestParameterSet.txt
vignettes/PSO.out/ConvergenceMeasures.txt
vignettes/PSO.out/LocalBest.txt
vignettes/PSO.out/LocalBestPerIter.txt
vignettes/PSO.out/Model_out.txt
vignettes/PSO.out/PSO_logfile.txt
vignettes/PSO.out/Particles.txt
vignettes/PSO.out/Particles_GofPerIter.txt
vignettes/PSO.out/Particles_Neighbours.txt
vignettes/PSO.out/PbestPerIter.txt
vignettes/PSO.out/Velocities.txt
vignettes/PSO.out/XMinMax.txt
vignettes/scratsch
