Files in edawson/tidysig

Plot mutational signatures using ggplot objects

R/arrange_vars.R R/compound_id_motifs.R R/drop_enforced_signatures.R R/normalize_counts.R R/per_sample_summary.R R/plot_ID83_signature.R R/plot_SBS96_signature.R R/plot_activities.R R/plot_signatures.R R/save_signature_plot.R R/tidy_signatureanalyzer.R R/tidy_sigprofiler.R R/tidysig.R R/tidysig_contexts_and_palettes.R README.md data-raw/id_83_colors.R data-raw/sbs_96_changes.R data-raw/sbs_96_changes_colors.R data-raw/sbs_96_contexts.R images/id83_example_plot.pdf images/sbs96_example_plot.pdf man/add_val_buffer.Rd man/calculate_smart_ylimits.Rd man/combine_context_change_cols.Rd man/convert_pcawg_to_sigprofiler_SBS96.Rd man/determine_context.Rd man/drop_enforced_signatures.Rd man/export_to_signatureanalyzer_word_SBS96.Rd man/export_to_sigprofiler_SBS96.Rd man/generate_plot.Rd man/get_maximum_amount.Rd man/get_minimum_amount.Rd man/id_83_colors.Rd man/load_pandas_hdf5_data.Rd man/normalize_counts.Rd man/normalize_sample_counts.Rd man/per_sample_counts_summary.Rd man/per_sample_proportions_summary.Rd man/per_sample_summary.Rd man/plot_ID83_signature.Rd man/plot_SBS96_signature.Rd man/plot_activities.Rd man/plot_context.Rd man/plot_signature.Rd man/read_pcawg_SBS96_csv.Rd man/save_signature_plot.Rd man/sbs_96_changes.Rd man/sbs_96_changes_colors.Rd man/sbs_96_contexts.Rd man/signature_activity_figure.Rd man/tidy_sigprof_ID83_df.Rd man/tidy_sigprof_SBS96_df.Rd man/tidy_sigprof_activities.Rd man/tidy_sigprof_id83_probabilities.Rd man/tidy_sigprof_sbs96_probabilities.Rd man/tidysig.Rd man/transform_sigprofiler_df.Rd man/transpose_sigprofiler_df.Rd scripts/devtools_install.R scripts/document.R scripts/make_id_plots.R scripts/make_sbs_plots.R test.R tests/testthat.R tests/testthat/test-plots.R tests/testthat/test-transformers.R