generate_plot: A helper function for plotting ID83 / SBS96 plots.

In edawson/tidysig: Plot mutational signatures using ggplot objects

Description

A helper function for plotting ID83 / SBS96 plots.

Usage

generate_plot(
  x,
  label = "Signature",
  title = "",
  xlabel = NULL,
  ylabel = "Count",
  usePercent = TRUE,
  ylimits = NULL,
  contextType = "SBS96"
)

Arguments

x	A TidySig dataframe/tibble
label	The right-side (i.e., facet) label. Usually "Signature" or "Sample" or a sample ID.
title	A title for the plot
xlabel	An x-axis label
ylabel	A y-axis label
usePercent	Use percent scales (rather than counts)
ylimits	Use custom ylimits (useful for normalizing the views of multiple signatures). Takes a numeric vector length-two.
contextType	An argument for determining the context, either ID83 or SBS96

Value

a ggplot2 object

edawson/tidysig documentation built on May 2, 2020, 5:33 a.m.