get_candidateaa: Generate candidate position-specific amino acid residues

In edpratt1/KINATESTID: A Pipeline for Kinase-Specific Artificial Peptide Design

Description

Generate candidate position-specific amino acid residues

Usage

get_candidateaa(fisher_tables, screener_dt, target_kinase)

Arguments

fisher_tables	A list containing two data tables: 1) Exact Test P-values and 2) Fisher Exact Odds.
screener_dt	A four-element list generated using the 'multi_screener()' function.
target_kinase	Abbreviation (typically 3 letter) for the enzyme the substrate is to be optimized for.

Value

A data.table containing candidate amino acid residues and associated p-value and odds from Fisher Exact Test.

edpratt1/KINATESTID documentation built on Feb. 5, 2022, 1:21 p.m.