import_uniprot: Generate an in silico control peptide library
In edpratt1/KINATESTID: A Pipeline for Kinase-Specific Artificial Peptide Design
Description
Usage
Arguments
Value
View source: R/uniprot_tryptic_digest.R
Description
Generate an in silico control peptide library
Usage
1
import_uniprot(substrates_dt, uniprot_digest, path)
Arguments
substrates_dt
An enzymatic preference data.table.
uniprot_digest
Raw file containing peptide fragments from an
in silico enzymatic digest.
path
The file path where output data should be saved.
Value
A data.table containing in silico negative peptide
sequences for each 'uniprot_id' found in the 'substrates_dt' file.
edpratt1/KINATESTID documentation built on Feb. 5, 2022, 1:21 p.m.
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Description Usage Arguments Value
View source: R/uniprot_tryptic_digest.R
Description
Generate an in silico control peptide library
Usage
1 | import_uniprot(substrates_dt, uniprot_digest, path)
|
Arguments
substrates_dt |
An enzymatic preference data.table. |
uniprot_digest |
Raw file containing peptide fragments from an in silico enzymatic digest. |
path |
The file path where output data should be saved. |
Value
A data.table containing in silico negative peptide sequences for each 'uniprot_id' found in the 'substrates_dt' file.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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