getXrefList: Get Xref List

In egonw/rWikiPathways: rWikiPathways - R client library for the WikiPathways API

Description

Retrieve the Xref identifiers for a specific pathway in a particular system code

Usage

getXrefList(pathway, systemCode)

Arguments

pathway	WikiPathways identifier (WPID) for the pathway to download, e.g. WP4
systemCode	(character) The BridgeDb code associated with the data source or system, e.g., En (Ensembl), L (Entrez), Ch (HMDB), etc. See column two of https://github.com/bridgedb/BridgeDb/blob/master/org.bridgedb.bio/src/main/resources/org/bridgedb/bio/datasources.tsv.

Value

A list of Xrefs identifiers

Examples

{
xrefs = getXrefList("WP2338", "L")
}

egonw/rWikiPathways documentation built on May 10, 2021, 11:52 a.m.