emvolz-phylodynamics/mlesky: Maximum likelihood estimation of effective population size through time, growth rates, and phylodynamic regressions

Maximum likelihood estimation of effective population size through time, growth rates, and phylodynamic regressions with non-genetic covariate time series. A likelihood-based cross-validation technique is used to choose smoothing parameters.

Getting started

Package details

AuthorErik Volz, Xavier Didelot
MaintainerErik Volz <erik.volz@gmail.com>
LicenseMIT + file LICENSE
Version0.1.8
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("emvolz-phylodynamics/mlesky")
emvolz-phylodynamics/mlesky documentation built on Feb. 13, 2025, 1:47 p.m.