optim_res_bic: Optimize the skygrid time axis resolution using BIC criterion
In emvolz-phylodynamics/mlesky: Maximum likelihood estimation of effective population size through time, growth rates, and phylodynamic regressions
optim_res_bic R Documentation
Optimize the skygrid time axis resolution using BIC criterion
Description
Optimize the skygrid time axis resolution using BIC criterion
Usage
optim_res_bic(tree, res = c(1:5, seq(10, 100, by = 10)), ncpu = 1, ...)
Arguments
tree
A dated phylogeny in ape::phylo format
res
A vector of time axis resolution parameters to test
ncpu
Integer number of cores to use with parallel processing
...
Remaining parameters are passed to mlskygrid
emvolz-phylodynamics/mlesky documentation built on Feb. 13, 2025, 1:47 p.m.
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| optim_res_bic | R Documentation |
Optimize the skygrid time axis resolution using BIC criterion
Description
Optimize the skygrid time axis resolution using BIC criterion
Usage
optim_res_bic(tree, res = c(1:5, seq(10, 100, by = 10)), ncpu = 1, ...)
Arguments
tree |
A dated phylogeny in ape::phylo format |
res |
A vector of time axis resolution parameters to test |
ncpu |
Integer number of cores to use with parallel processing |
... |
Remaining parameters are passed to mlskygrid |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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