simCoal: Simulation of coalescent dated phylogeny
In emvolz-phylodynamics/mlesky: Maximum likelihood estimation of effective population size through time, growth rates, and phylodynamic regressions
simCoal R Documentation
Simulation of coalescent dated phylogeny
Description
Simulation of coalescent dated phylogeny
Usage
simCoal(
dates = 1990:2010,
alphaFun = function(x) {
return(10)
},
alphaMin = NA
)
Arguments
dates
Sampling dates
alphaFun
Population size function Ne(t)
alphaMin
Minimum value of alphaFun
Value
A simulated dated phylogeny
emvolz-phylodynamics/mlesky documentation built on Feb. 13, 2025, 1:47 p.m.
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| simCoal | R Documentation |
Simulation of coalescent dated phylogeny
Description
Simulation of coalescent dated phylogeny
Usage
simCoal(
dates = 1990:2010,
alphaFun = function(x) {
return(10)
},
alphaMin = NA
)
Arguments
dates |
Sampling dates |
alphaFun |
Population size function Ne(t) |
alphaMin |
Minimum value of alphaFun |
Value
A simulated dated phylogeny
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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