tree_combiner_helper: Wrapper for logcombiner

Description Usage Arguments

View source: R/treepl.R

Description

Wrapper for logcombiner

Usage

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tree_combiner_helper(
  burnin,
  fns = NULL,
  ofn = "combined.trees",
  resample = NULL
)

Arguments

burnin

Unix: Integer number of MCMC iters to treat as burnin; In windows this is the percentage burnin as a number

fns

List of tree log files. If not provided, will recursively search the directory for logs

resample

set this to downsample logs further when combining


emvolz-phylodynamics/sarscov2Rutils documentation built on Nov. 17, 2020, 9:22 a.m.