epiviz/epivizr-release: R Interface to epiviz web app
Version 1.6.7

This package provides Websocket communication to the epiviz web app (http://epiviz.cbcb.umd.edu) for interactive visualization of genomic data. Objects in R/bioc interactive sessions can be displayed in genome browser tracks or plots to be explored by navigation through genomic regions. Fundamental Bioconductor data structures are supported (e.g., GenomicRanges and SummarizedExperiment objects), while providing an easy mechanism to support other data structures. Visualizations (using d3.js) can be easily added to the web app as well.

Getting started

Package details

AuthorHector Corrada Bravo, Florin Chelaru, Llewellyn Smith, Naomi Goldstein
Bioconductor views GUI Infrastructure Visualization
MaintainerHector Corrada Bravo <[email protected]>
LicenseArtistic-2.0
Version1.6.7
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("epiviz/epivizr-release")
epiviz/epivizr-release documentation built on May 13, 2017, 7:12 p.m.