Description Usage Arguments Author(s) Examples
Plot different values per segment against each other (e.g. minor and major allele estimates).
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x |
The values plotted for x coordinates (e.g. segmentation value for minor allele) |
y |
The values plotted for y coordinates (e.g. segmentation value for major allele) |
nX |
The grouping id for the x coordinate (e.g. assignment of number of copies) |
nY |
The grouping id for the y coordinate (e.g. assignment of number of copies) |
xleg |
title for the legend of the x values |
yleg |
title for the legend of the y values |
xlim |
limits for the x axis |
ylim |
limits for the y axis |
onlyPositive |
only plot values positive in x and y |
equalAxis |
xlim and ylim are forced to be the same |
integerLegend |
Only give integers |
... |
passed to the scatter plot command |
Elizabeth Purdom
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