Files in eriqande/afblue
Best Linear Unbiased Erediction of Allele Frequencies Given Pairwise Kinship
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R-Robin/ESS.R
R-Robin/Sims.R
R-main/01-predict-ess.R
R-main/coho-afblue-analysis.R
R-main/ugly-func-to-source.R
R-supp/ccc-sonc-functions.R
R/a_freq_blue.R
R/hello.R
R/import.R
R/matrix_L_from_pedigree.R
R/optimal_z.R
R/read_colony_best_config.R
R/slg_pipe2long.R
R/traditional_sib_yank.R
R/unexported_utilities.R
R/weights_from_matrix_L.R
README.Rmd
README.md
afblue.Rproj
doc/Rmd/eric-additions.Rmd
doc/Rmd/ericadd.bib
doc/Sibremoval4-eca.docx
doc/Sibremoval5-eca-updates.docx
doc/Sibremoval6-eca-updates.docx
inputs/colony_results/ALBa/Colony-Run-1/output.BestConfig
inputs/colony_results/ALBa/Permed-Run-1/output.BestConfig
inputs/colony_results/ALBb/Colony-Run-1/output.BestConfig
inputs/colony_results/ALBb/Permed-Run-1/output.BestConfig
inputs/colony_results/BIGa/Colony-Run-1/output.BestConfig
inputs/colony_results/BIGa/Permed-Run-1/output.BestConfig
inputs/colony_results/BIGb/Colony-Run-1/output.BestConfig
inputs/colony_results/BIGb/Permed-Run-1/output.BestConfig
inputs/colony_results/BSAa/Colony-Run-1/output.BestConfig
inputs/colony_results/BSAa/Permed-Run-1/output.BestConfig
inputs/colony_results/BSAb/Colony-Run-1/output.BestConfig
inputs/colony_results/BSAb/Permed-Run-1/output.BestConfig
inputs/colony_results/CASa/Colony-Run-1/output.BestConfig
inputs/colony_results/CASa/Permed-Run-1/output.BestConfig
inputs/colony_results/CASb/Colony-Run-1/output.BestConfig
inputs/colony_results/CASb/Permed-Run-1/output.BestConfig
inputs/colony_results/CHEb/Colony-Run-1/output.BestConfig
inputs/colony_results/CHEb/Permed-Run-1/output.BestConfig
inputs/colony_results/CHJb/Colony-Run-1/output.BestConfig
inputs/colony_results/CHJb/Permed-Run-1/output.BestConfig
inputs/colony_results/COTa/Colony-Run-1/output.BestConfig
inputs/colony_results/COTa/Permed-Run-1/output.BestConfig
inputs/colony_results/EHTa/Colony-Run-1/output.BestConfig
inputs/colony_results/EHTa/Permed-Run-1/output.BestConfig
inputs/colony_results/EHTb/Colony-Run-1/output.BestConfig
inputs/colony_results/EHTb/Permed-Run-1/output.BestConfig
inputs/colony_results/ELAb/Colony-Run-1/output.BestConfig
inputs/colony_results/ELAb/Permed-Run-1/output.BestConfig
inputs/colony_results/ELPb/Colony-Run-1/output.BestConfig
inputs/colony_results/ELPb/Permed-Run-1/output.BestConfig
inputs/colony_results/FWCa/Colony-Run-1/output.BestConfig
inputs/colony_results/FWCa/Permed-Run-1/output.BestConfig
inputs/colony_results/FWCb/Colony-Run-1/output.BestConfig
inputs/colony_results/FWCb/Permed-Run-1/output.BestConfig
inputs/colony_results/GCNb/Colony-Run-1/output.BestConfig
inputs/colony_results/GCNb/Permed-Run-1/output.BestConfig
inputs/colony_results/GCSb/Colony-Run-1/output.BestConfig
inputs/colony_results/GCSb/Permed-Run-1/output.BestConfig
inputs/colony_results/KBVa/Colony-Run-1/output.BestConfig
inputs/colony_results/KBVa/Permed-Run-1/output.BestConfig
inputs/colony_results/KCCa/Colony-Run-1/output.BestConfig
inputs/colony_results/KCCa/Permed-Run-1/output.BestConfig
inputs/colony_results/KCCb/Colony-Run-1/output.BestConfig
inputs/colony_results/KCCb/Permed-Run-1/output.BestConfig
inputs/colony_results/KMGa/Colony-Run-1/output.BestConfig
inputs/colony_results/KMGa/Permed-Run-1/output.BestConfig
inputs/colony_results/KMGb/Colony-Run-1/output.BestConfig
inputs/colony_results/KMGb/Permed-Run-1/output.BestConfig
inputs/colony_results/KSCa/Colony-Run-1/output.BestConfig
inputs/colony_results/KSCa/Permed-Run-1/output.BestConfig
inputs/colony_results/KSCb/Colony-Run-1/output.BestConfig
inputs/colony_results/KSCb/Permed-Run-1/output.BestConfig
inputs/colony_results/KSHa/Colony-Run-1/output.BestConfig
inputs/colony_results/KSHa/Permed-Run-1/output.BestConfig
inputs/colony_results/KSHb/Colony-Run-1/output.BestConfig
inputs/colony_results/KSHb/Permed-Run-1/output.BestConfig
inputs/colony_results/KSSa/Colony-Run-1/output.BestConfig
inputs/colony_results/KSSa/Permed-Run-1/output.BestConfig
inputs/colony_results/KSSb/Colony-Run-1/output.BestConfig
inputs/colony_results/KSSb/Permed-Run-1/output.BestConfig
inputs/colony_results/KTDa/Colony-Run-1/output.BestConfig
inputs/colony_results/KTDa/Permed-Run-1/output.BestConfig
inputs/colony_results/KTDb/Colony-Run-1/output.BestConfig
inputs/colony_results/KTDb/Permed-Run-1/output.BestConfig
inputs/colony_results/KTSa/Colony-Run-1/output.BestConfig
inputs/colony_results/KTSa/Permed-Run-1/output.BestConfig
inputs/colony_results/KTSb/Colony-Run-1/output.BestConfig
inputs/colony_results/KTSb/Permed-Run-1/output.BestConfig
inputs/colony_results/LAGa/Colony-Run-1/output.BestConfig
inputs/colony_results/LAGa/Permed-Run-1/output.BestConfig
inputs/colony_results/LAGb/Colony-Run-1/output.BestConfig
inputs/colony_results/LAGb/Permed-Run-1/output.BestConfig
inputs/colony_results/LDGa/Colony-Run-1/output.BestConfig
inputs/colony_results/LDGa/Permed-Run-1/output.BestConfig
inputs/colony_results/LDGb/Colony-Run-1/output.BestConfig
inputs/colony_results/LDGb/Permed-Run-1/output.BestConfig
inputs/colony_results/LITa/Colony-Run-1/output.BestConfig
inputs/colony_results/LITa/Permed-Run-1/output.BestConfig
inputs/colony_results/LITb/Colony-Run-1/output.BestConfig
inputs/colony_results/LITb/Permed-Run-1/output.BestConfig
inputs/colony_results/LOLa/Colony-Run-1/output.BestConfig
inputs/colony_results/LOLa/Permed-Run-1/output.BestConfig
inputs/colony_results/LOLb/Colony-Run-1/output.BestConfig
inputs/colony_results/LOLb/Permed-Run-1/output.BestConfig
inputs/colony_results/LTUa/Colony-Run-1/output.BestConfig
inputs/colony_results/LTUa/Permed-Run-1/output.BestConfig
inputs/colony_results/LTUb/Colony-Run-1/output.BestConfig
inputs/colony_results/LTUb/Permed-Run-1/output.BestConfig
inputs/colony_results/MDSa/Colony-Run-1/output.BestConfig
inputs/colony_results/MDSa/Permed-Run-1/output.BestConfig
inputs/colony_results/MDSb/Colony-Run-1/output.BestConfig
inputs/colony_results/MDSb/Permed-Run-1/output.BestConfig
inputs/colony_results/MPLa/Colony-Run-1/output.BestConfig
inputs/colony_results/MPLa/Permed-Run-1/output.BestConfig
inputs/colony_results/MPLb/Colony-Run-1/output.BestConfig
inputs/colony_results/MPLb/Permed-Run-1/output.BestConfig
inputs/colony_results/MTTa/Colony-Run-1/output.BestConfig
inputs/colony_results/MTTa/Permed-Run-1/output.BestConfig
inputs/colony_results/MTTb/Colony-Run-1/output.BestConfig
inputs/colony_results/MTTb/Permed-Run-1/output.BestConfig
inputs/colony_results/NOYa/Colony-Run-1/output.BestConfig
inputs/colony_results/NOYa/Permed-Run-1/output.BestConfig
inputs/colony_results/NOYb/Colony-Run-1/output.BestConfig
inputs/colony_results/NOYb/Permed-Run-1/output.BestConfig
inputs/colony_results/NVFb/Colony-Run-1/output.BestConfig
inputs/colony_results/NVFb/Permed-Run-1/output.BestConfig
inputs/colony_results/NVJa/Colony-Run-1/output.BestConfig
inputs/colony_results/NVJa/Permed-Run-1/output.BestConfig
inputs/colony_results/NVJb/Colony-Run-1/output.BestConfig
inputs/colony_results/NVJb/Permed-Run-1/output.BestConfig
inputs/colony_results/PUDa/Colony-Run-1/output.BestConfig
inputs/colony_results/PUDa/Permed-Run-1/output.BestConfig
inputs/colony_results/PUDb/Colony-Run-1/output.BestConfig
inputs/colony_results/PUDb/Permed-Run-1/output.BestConfig
inputs/colony_results/REDa/Colony-Run-1/output.BestConfig
inputs/colony_results/REDa/Permed-Run-1/output.BestConfig
inputs/colony_results/REDb/Colony-Run-1/output.BestConfig
inputs/colony_results/REDb/Permed-Run-1/output.BestConfig
inputs/colony_results/ROAb/Colony-Run-1/output.BestConfig
inputs/colony_results/ROAb/Permed-Run-1/output.BestConfig
inputs/colony_results/ROIb/Colony-Run-1/output.BestConfig
inputs/colony_results/ROIb/Permed-Run-1/output.BestConfig
inputs/colony_results/ROKb/Colony-Run-1/output.BestConfig
inputs/colony_results/ROKb/Permed-Run-1/output.BestConfig
inputs/colony_results/ROLb/Colony-Run-1/output.BestConfig
inputs/colony_results/ROLb/Permed-Run-1/output.BestConfig
inputs/colony_results/ROTb/Colony-Run-1/output.BestConfig
inputs/colony_results/ROTb/Permed-Run-1/output.BestConfig
inputs/colony_results/ROVb/Colony-Run-1/output.BestConfig
inputs/colony_results/ROVb/Permed-Run-1/output.BestConfig
inputs/colony_results/RPRa/Colony-Run-1/output.BestConfig
inputs/colony_results/RPRa/Permed-Run-1/output.BestConfig
inputs/colony_results/RPRb/Colony-Run-1/output.BestConfig
inputs/colony_results/RPRb/Permed-Run-1/output.BestConfig
inputs/colony_results/SCCa/Colony-Run-1/output.BestConfig
inputs/colony_results/SCCa/Permed-Run-1/output.BestConfig
inputs/colony_results/SCCb/Colony-Run-1/output.BestConfig
inputs/colony_results/SCCb/Permed-Run-1/output.BestConfig
inputs/colony_results/TNCb/Colony-Run-1/output.BestConfig
inputs/colony_results/TNCb/Permed-Run-1/output.BestConfig
inputs/colony_results/TNLa/Colony-Run-1/output.BestConfig
inputs/colony_results/TNLa/Permed-Run-1/output.BestConfig
inputs/colony_results/TNLb/Colony-Run-1/output.BestConfig
inputs/colony_results/TNLb/Permed-Run-1/output.BestConfig
inputs/colony_results/TNRb/Colony-Run-1/output.BestConfig
inputs/colony_results/TNRb/Permed-Run-1/output.BestConfig
inputs/colony_results/WAGa/Colony-Run-1/output.BestConfig
inputs/colony_results/WAGa/Permed-Run-1/output.BestConfig
inputs/colony_results/WAGb/Colony-Run-1/output.BestConfig
inputs/colony_results/WAGb/Permed-Run-1/output.BestConfig
inputs/colony_results/WILa/Colony-Run-1/output.BestConfig
inputs/colony_results/WILa/Permed-Run-1/output.BestConfig
inputs/colony_results/WILb/Colony-Run-1/output.BestConfig
inputs/colony_results/WILb/Permed-Run-1/output.BestConfig
inputs/colony_results/WLKb/Colony-Run-1/output.BestConfig
inputs/colony_results/WLKb/Permed-Run-1/output.BestConfig
inst/extdata/output.BestConfig
man/a_freq_blue.Rd
man/add_founder_rows.Rd
man/matrix_L_from_pedigree.Rd
man/optimal_z.Rd
man/pipe.Rd
man/read_colony_best_config.Rd
man/slg_pipe2long.Rd
man/traditional_sib_yank.Rd
man/weights_from_matrix_L.Rd
