gPdf2gsi.sim: convert a 'gPipe.data.frame' into a gsi_sim input file
In eriqande/gpiper: Genetic analysis pipelines from SWFSC's Molecular Ecology and Genetic Analysis Team
Description
gPdf2gsi.sim takes as input a data frame in gPipe.data.frame format
converts it into a gsi_sim input file. If you supply a list of pop-names
(preferably as a factor with levels ordered as you want the pops to appear) to the
pop.ize.them variable, then it splits them into pops, ordered as in the factor
Usage
1
gPdf2gsi.sim(d, pop.ize.them = NULL, outfile = "gsi_sim_file.txt")
Arguments
d
the data frame. See documentation for gPipe.data.frame for format
pop.ize.them
vector that should be of length nrow(d) that gives the populations in which the individuals belong. It this is a factor, then populations are placed in the gsi_sim output file according to the order in the levels attribute of the factor.
outfile
path to the output file
eriqande/gpiper documentation built on May 16, 2019, 8:46 a.m.
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Description
gPdf2gsi.sim takes as input a data frame in gPipe.data.frame format
converts it into a gsi_sim input file. If you supply a list of pop-names
(preferably as a factor with levels ordered as you want the pops to appear) to the
pop.ize.them variable, then it splits them into pops, ordered as in the factor
Usage
1 | gPdf2gsi.sim(d, pop.ize.them = NULL, outfile = "gsi_sim_file.txt")
|
Arguments
d |
the data frame. See documentation for |
pop.ize.them |
vector that should be of length |
outfile |
path to the output file |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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