gsi_aggScoresByRepUnit: sum gsi_sim posteriors over populations in reporting units
In eriqande/gpiper: Genetic analysis pipelines from SWFSC's Molecular Ecology and Genetic Analysis Team
Description
given a data frame x that has columns represententing scores (like posterior
probs) for each population in the pops.str (which should be a character
vector of population names) which are themselves grouped into reporting
units according to rep.units (preferably a factor), this returns a new data frame
with all the non-pop columns first and then the pop columns aggregated by summing
them up.
Usage
1
gsi_aggScoresByRepUnit(x, pops.str, rep.units)
Arguments
x
data frame like that obtained by reading in "pop_pofz_full_em_mle.txt" or a similar output file
from gsi_sim (with rownames=1)
pops.str
names of the populations that are the column names of x
rep.units
factor vector of same length as pops.str which given the reporting units of the populations in pops.str
eriqande/gpiper documentation built on May 16, 2019, 8:46 a.m.
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Description
given a data frame x that has columns represententing scores (like posterior probs) for each population in the pops.str (which should be a character vector of population names) which are themselves grouped into reporting units according to rep.units (preferably a factor), this returns a new data frame with all the non-pop columns first and then the pop columns aggregated by summing them up.
Usage
1 | gsi_aggScoresByRepUnit(x, pops.str, rep.units)
|
Arguments
x |
data frame like that obtained by reading in "pop_pofz_full_em_mle.txt" or a similar output file from gsi_sim (with rownames=1) |
pops.str |
names of the populations that are the column names of x |
rep.units |
factor vector of same length as pops.str which given the reporting units of the populations in pops.str |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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