fetch_custom_sample_covariates.FacileDataSet: Fetches custom (user) annotations for a given user prefix

In facilebio/FacileData: A fluent API for accessing multi-assay high-throughput genomics data

Fetches custom (user) annotations for a given user prefix

Description

Fetches custom (user) annotations for a given user prefix

Usage

## S3 method for class 'FacileDataSet'
fetch_custom_sample_covariates(
  x,
  covariates = NULL,
  samples = NULL,
  custom_key = Sys.getenv("USER"),
  with_source = FALSE,
  file.prefix = "facile",
  ...
)

Arguments

samples	the facile sample descriptor
custom_key	The key to use for the custom annotation
fds	The FacileDataSet

Value

covariate tbl

See Also

Other API: fetch_assay_score.FacileDataSet(), fetch_sample_covariates(), fetch_sample_statistics.FacileDataSet(), fetch_samples.FacileDataSet(), filter_features.FacileDataSet(), filter_samples.FacileDataSet(), organism.FacileDataSet(), samples.FacileDataSet()

facilebio/FacileData documentation built on Feb. 23, 2024, 9:14 a.m.