plot.hybridsim: Plotting hybridsim objects
In fbalao/AFLPsim: Hybrid Simulation and Genome Scan for Dominant Markers

Description Usage Arguments Author(s) See Also Examples

A hybridsim object can be plotted using the function plot.hybridsim, which is also used as the dedicated plot method. This function represents expected hybrid markers frequencies on a neutral sheet.

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## S3 method for class 'hybridsim'
plot(x,hybrid = c("F1", "BxA", "BxB"), col = "lightgreen",
 shade = 0.8, markers = x$SelMarkers, ...)

`x`	A `hybridsim` object.
`hybrid`	The hybrid classes to simulate: `"F1"`, `"BxA"` or `"BxB"`.
`col`	A specification for the default plotting color.
`shade`	A specification for the default alpha value.
`markers`	a numeric vector with markers to plot. By default markers under selection by `hybridsim` function.
`...`	Arguments to be passed to methods, such as graphical parameters (see `par`).

F. Balao fbalao@us.es, J.L. GarcÃa-CastaÃ±o

hybridsim hybridize

## simulate parentals and F1 hybrids
hybrids<-hybridsim(Nmarker=100, Na=30, Nb=30, Nf1=30, type="selection", S=1, Nsel=25, hybrid="F1")

plot.hybridsim(hybrids, hybrid="F1")