extract_sequences | Write sequences associated with sampled IDs to a multifasta... |
extract_taxlevel | Extract the desired ancestry level of a list of taxonomy IDs |
get_counts | Return the relevant counts for running TaxonSampling |
get_summary_df | Generate a summary dataframe from the result of run_TS |
get_taxID_spp_counts | Count number of species under each taxonomy ID |
plot.taxonsampling | plot.taxonsampling |
retrieve_data_files | Retrieve data files from the Github repository |
retrieve_NCBI_taxonomy | Retrieve NCBI taxonomy file from public database |
run_TS | Run Taxon Sampling |
summary.taxonsampling | summary.taxonsampling |
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