compute_survival_table: A Function That Computes Survival Table.
In fchuffar/epimedtools: Useful Tools Allowing Multi-Omics Analysis
compute_survival_table R Documentation
A Function That Computes Survival Table.
Description
This function computes the false discovery rate from a vector of independent p-values.
It extracts the cutoff corresponding to the specified FDR. See Benjamini & Hochberg 1995 paper.
Usage
compute_survival_table(probe_names, sample_names, exp_grp_key, study,
suffix = "", USE_CACHE = FALSE, PLOT_SCURVE = FALSE)
Arguments
probe_names
index of probes to consider
sample_names
index of samples to consider
exp_grp_key
the column name of the exprimental grouping to considere
study
An Reference classes object that contains data and metadata
suffix
A character string used to suffix the cache file nam
USE_CACHE
A boolean set to TRUE if cache could be used
PLOT_SCURVE
A boolean set to TRUE if Survival curve of the corresponding 'exp_grp_key' needs to be ploted.
Value
A dataframe taht contains survival infirmations
fchuffar/epimedtools documentation built on Feb. 3, 2024, 2:21 a.m.
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| compute_survival_table | R Documentation |
A Function That Computes Survival Table.
Description
This function computes the false discovery rate from a vector of independent p-values. It extracts the cutoff corresponding to the specified FDR. See Benjamini & Hochberg 1995 paper.
Usage
compute_survival_table(probe_names, sample_names, exp_grp_key, study,
suffix = "", USE_CACHE = FALSE, PLOT_SCURVE = FALSE)
Arguments
probe_names |
index of probes to consider |
sample_names |
index of samples to consider |
exp_grp_key |
the column name of the exprimental grouping to considere |
study |
An Reference classes object that contains data and metadata |
suffix |
A character string used to suffix the cache file nam |
USE_CACHE |
A boolean set to TRUE if cache could be used |
PLOT_SCURVE |
A boolean set to TRUE if Survival curve of the corresponding 'exp_grp_key' needs to be ploted. |
Value
A dataframe taht contains survival infirmations
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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