get_exprin_app | R Documentation |
This function runs heatmap app.
get_exprin_app(studies, gene_symbols, height = "5000",
var = c("samples", "raw", "genome"), USE_CLUST = c(TRUE, FALSE),
kern_dim = 1, ALL_CURVE = FALSE, nb_clust = 3,
pf_col_label = "exo", exp_grp_col = "tissue_status",
exp_grp_col_label, second, BREAK_TOO_EXPENSIVE = BREAK_TOO_EXPENSIVE,
...)
height |
string specifying the height oh the app |
var |
A vector defining the distances used to cluster data |
USE_CLUST |
A boolean specifying if dendogram needs to be plotted |
kern_dim |
the size of the kernel used to smooth RNAseq signal |
ALL_CURVE |
A boolean specifying if individual RNAseq signal needs to be plotted |
nb_clust |
An interger specifying the number of cluster |
pf_col_label |
A platform column name use to label gene axis |
exp_grp_col |
An exp_grp column name use to label sample |
exp_grp_col_label |
exprimental |
second |
exprimental |
BREAK_TOO_EXPENSIVE |
A boolean specifying if too expensive operation must be breaked. |
... |
argument passed to plot_rna_sig function |
study |
An epimedtools Study RC object |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.