fgseaRes: A sample output from fgsea
In federicomarini/GeneTonic: Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional Enrichment Analysis
fgseaRes R Documentation
A sample output from fgsea
Description
A sample output object as created from a call to the fgsea() function, in
the fgsea package, as a practical framework for performing GSEA
Details
This object has been created on the data from the macrophage package
by analyzing downstream the differentially expressed genes
when comparing IFNg treated samples vs naive samples, accounting
for the different cell lines included.
References
Alasoo, et al. "Shared genetic effects on chromatin and gene
expression indicate a role for enhancer priming in immune response",
Nature Genetics, January 2018 doi: 10.1038/s41588-018-0046-7.
federicomarini/GeneTonic documentation built on Oct. 10, 2024, 8:49 p.m.
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| fgseaRes | R Documentation |
A sample output from fgsea
Description
A sample output object as created from a call to the fgsea() function, in
the fgsea package, as a practical framework for performing GSEA
Details
This object has been created on the data from the macrophage package
by analyzing downstream the differentially expressed genes
when comparing IFNg treated samples vs naive samples, accounting
for the different cell lines included.
References
Alasoo, et al. "Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response", Nature Genetics, January 2018 doi: 10.1038/s41588-018-0046-7.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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