merged_arriba_tcga: merged_arriba_tcga.tsv

merged_arriba_tcgaR Documentation

merged_arriba_tcga.tsv

Description

detailed desc 8983 * 28 columns

Format

When read in via read.delim, the following information is available:

  • X.gene1

  • gene2

  • strand1.gene.fusion.

  • strand2.gene.fusion.

  • breakpoint1

  • breakpoint2

  • site1

  • site2

  • type

  • direction1

  • direction2

  • split_reads1

  • split_reads2

  • discordant_mates

  • coverage1

  • coverage2

  • confidence

  • closest_genomic_breakpoint1

  • closest_genomic_breakpoint2

  • filters

  • fusion_transcript

  • reading_frame

  • peptide_sequence

  • read_identifiers

  • Sample

  • gene1..gene2

  • annots

  • Caller

References

if any


federicomarini/annoFuseData documentation built on Aug. 3, 2024, 4:48 p.m.