API for feiyoung/DR.SC
Joint Dimension Reduction and Spatial Clustering
| Global functions | |
|---|---|
| .logDiffTime | Source code |
| .logTime | Source code |
| .onAttach | Source code |
| DR.SC | Man page Source code |
| DR.SC.Seurat | Man page Source code |
| DR.SC_fit | Man page Source code |
| EMmPCpp_heter | Source code |
| FindSVGs | Man page Source code |
| RunWPCA | Man page Source code |
| RunWPCA.Seurat | Source code |
| RunWPCA.dgCMatrix | Source code |
| RunWPCA.matrix | Source code |
| approxPCA | Source code |
| calYenergy2D_sp | Source code |
| calculateWeight | Source code |
| dlpfc151510 | Man page |
| drsc | Source code |
| drscPlot | Man page Source code |
| extractInfModel | Source code |
| find_neighbors | Source code |
| gendata_RNAExp | Man page Source code |
| gendata_noSp | Source code |
| gendata_sp | Source code |
| getAdj | Man page Source code |
| getAdj.Seurat | Man page Source code |
| getAdj_auto | Man page Source code |
| getAdj_manual | Man page Source code |
| getAdj_reg | Source code |
| getPairDist | Source code |
| get_data_fromSeurat | Source code |
| get_varfeature_fromSeurat | Source code |
| getneighborhood_fast | Man page Source code |
| icmem_heterCpp | Source code |
| mbicPlot | Man page Source code |
| mycluster | Source code |
| obj_beta | Source code |
| parafun1 | Source code |
| parfun_int | Source code |
| read10XVisium | Man page |
| readscRNAseq | Man page Source code |
| selectClustNumber | Source code |
| selectFacNumber | Source code |
| selectModel | Man page Source code |
| selectModel.Seurat | Man page Source code |
| selectModel.drscObject | Man page Source code |
| simulDRcluster | Source code |
| sp_means_Rcpp | Man page Source code |
| sp_sums_Rcpp | Man page Source code |
| sparkx.sk | Source code |
| spatialPlotClusters | Man page Source code |
| topSVGs | Man page Source code |
| wpca | Source code |
| wpca2 | Source code |
| wpcaCpp | Source code |
