Files in femeunier/SoilSensitivity

.RData
.Rbuildignore
.Rhistory
.Rproj.user/1C6A92A/console06/INDEX001
.Rproj.user/1C6A92A/cpp-definition-cache
.Rproj.user/1C6A92A/pcs/debug-breakpoints.pper
.Rproj.user/1C6A92A/pcs/files-pane.pper
.Rproj.user/1C6A92A/pcs/packages-pane.pper
.Rproj.user/1C6A92A/pcs/source-pane.pper
.Rproj.user/1C6A92A/pcs/windowlayoutstate.pper
.Rproj.user/1C6A92A/pcs/workbench-pane.pper
.Rproj.user/1C6A92A/persistent-state
.Rproj.user/1C6A92A/rmd-outputs
.Rproj.user/1C6A92A/saved_source_markers
.Rproj.user/1C6A92A/sources/prop/1A5BC70B
.Rproj.user/1C6A92A/sources/prop/2AD5F22F
.Rproj.user/1C6A92A/sources/prop/2E82F06C
.Rproj.user/1C6A92A/sources/prop/34F3036C
.Rproj.user/1C6A92A/sources/prop/3A11E36
.Rproj.user/1C6A92A/sources/prop/7979F794
.Rproj.user/1C6A92A/sources/prop/79A13CEA
.Rproj.user/1C6A92A/sources/prop/81CB26E2
.Rproj.user/1C6A92A/sources/prop/81E134A8
.Rproj.user/1C6A92A/sources/prop/82D17BF
.Rproj.user/1C6A92A/sources/prop/8E655221
.Rproj.user/1C6A92A/sources/prop/9BBD033F
.Rproj.user/1C6A92A/sources/prop/B7D77B38
.Rproj.user/1C6A92A/sources/prop/C1ABF109
.Rproj.user/1C6A92A/sources/prop/D978D3A7
.Rproj.user/1C6A92A/sources/prop/DC26EEC8
.Rproj.user/1C6A92A/sources/prop/E68F4030
.Rproj.user/1C6A92A/sources/prop/EC7FA377
.Rproj.user/1C6A92A/sources/prop/FD2DECE1
.Rproj.user/1C6A92A/sources/prop/INDEX
.Rproj.user/CE900C3A/console06/INDEX001
.Rproj.user/CE900C3A/cpp-definition-cache
.Rproj.user/CE900C3A/pcs/debug-breakpoints.pper
.Rproj.user/CE900C3A/pcs/files-pane.pper
.Rproj.user/CE900C3A/pcs/packages-pane.pper
.Rproj.user/CE900C3A/pcs/source-pane.pper
.Rproj.user/CE900C3A/pcs/windowlayoutstate.pper
.Rproj.user/CE900C3A/pcs/workbench-pane.pper
.Rproj.user/CE900C3A/persistent-state
.Rproj.user/CE900C3A/rmd-outputs
.Rproj.user/CE900C3A/saved_source_markers
.Rproj.user/CE900C3A/sources/per/t/1B8465C7
.Rproj.user/CE900C3A/sources/per/t/1B8465C7-contents
.Rproj.user/CE900C3A/sources/per/t/31895A48
.Rproj.user/CE900C3A/sources/per/t/31895A48-contents
.Rproj.user/CE900C3A/sources/per/t/3A8B1474
.Rproj.user/CE900C3A/sources/per/t/3A8B1474-contents
.Rproj.user/CE900C3A/sources/per/t/6004CC88
.Rproj.user/CE900C3A/sources/per/t/6004CC88-contents
.Rproj.user/CE900C3A/sources/per/t/67686B80
.Rproj.user/CE900C3A/sources/per/t/67686B80-contents
.Rproj.user/CE900C3A/sources/per/t/A35C3604
.Rproj.user/CE900C3A/sources/per/t/A35C3604-contents
.Rproj.user/CE900C3A/sources/per/t/D6C11C90
.Rproj.user/CE900C3A/sources/per/t/D6C11C90-contents
.Rproj.user/CE900C3A/sources/per/t/ED527F4
.Rproj.user/CE900C3A/sources/per/t/ED527F4-contents
.Rproj.user/CE900C3A/sources/per/t/F6C60DF1
.Rproj.user/CE900C3A/sources/per/t/F6C60DF1-contents
.Rproj.user/CE900C3A/sources/prop/1FC7D2F7
.Rproj.user/CE900C3A/sources/prop/2F926CEA
.Rproj.user/CE900C3A/sources/prop/320639F0
.Rproj.user/CE900C3A/sources/prop/3C2CDA85
.Rproj.user/CE900C3A/sources/prop/62DA132B
.Rproj.user/CE900C3A/sources/prop/673E8A0B
.Rproj.user/CE900C3A/sources/prop/882E827
.Rproj.user/CE900C3A/sources/prop/888C7076
.Rproj.user/CE900C3A/sources/prop/8C0D0362
.Rproj.user/CE900C3A/sources/prop/937939AF
.Rproj.user/CE900C3A/sources/prop/A018FF6F
.Rproj.user/CE900C3A/sources/prop/A0BB21D1
.Rproj.user/CE900C3A/sources/prop/A6D2AE54
.Rproj.user/CE900C3A/sources/prop/AD2DEF52
.Rproj.user/CE900C3A/sources/prop/B647EA59
.Rproj.user/CE900C3A/sources/prop/B7877DFB
.Rproj.user/CE900C3A/sources/prop/B9A15D90
.Rproj.user/CE900C3A/sources/prop/BEA6466C
.Rproj.user/CE900C3A/sources/prop/C0133B99
.Rproj.user/CE900C3A/sources/prop/C3488077
.Rproj.user/CE900C3A/sources/prop/C675DC28
.Rproj.user/CE900C3A/sources/prop/C863A36C
.Rproj.user/CE900C3A/sources/prop/D9D1616D
.Rproj.user/CE900C3A/sources/prop/DA1485C5
.Rproj.user/CE900C3A/sources/prop/DADD775B
.Rproj.user/CE900C3A/sources/prop/E61CCDA3
.Rproj.user/CE900C3A/sources/prop/E9E01123
.Rproj.user/CE900C3A/sources/prop/F2EB9A78
.Rproj.user/CE900C3A/sources/prop/F4606288
.Rproj.user/CE900C3A/sources/prop/F6C26F61
.Rproj.user/CE900C3A/sources/prop/F8B56017
.Rproj.user/CE900C3A/sources/prop/INDEX
.Rproj.user/shared/notebooks/patch-chunk-names
.Rproj.user/shared/notebooks/paths
.gitignore
DESCRIPTION
Figures/A.png
Figures/AGB.density.png
Figures/AGB.density_nodata.png
Figures/AGBmap.png
Figures/Amazon.png
Figures/Amazon1.png
Figures/Amazon2.png
Figures/B.png
Figures/Boxplot.GPP.png
Figures/CO2.png
Figures/Crash.PLJ.png
Figures/Densities.png
Figures/Density.png
Figures/Diff_properties.png
Figures/FAO.png
Figures/Figure.soil.change.png
Figures/Figure.soil.changeED2.png
Figures/Figure.soil.changeLPJ-GUESS.png
Figures/Figure.soil.changeORCHIDEE.png
Figures/Figure.soil.change_legend.png
Figures/Figure1.png
Figures/Figure3.png
Figures/Figure5.png
Figures/Figure_AGB.png
Figures/Figure_PFT.png
Figures/Figure_SoilC.png
Figures/Figure_clay_sand_dis.png
Figures/Figure_fsw.png
Figures/Figure_hydro_diff.png
Figures/Figure_hydro_mean.png
Figures/Figure_model.png
Figures/Figures_AGB.png
Figures/Figures_SoilSens.odg
Figures/Figures_SoilSens.png
Figures/Figures_Spinup.png
Figures/MAP.png
Figures/MAT.png
Figures/SOC.png
Figures/Sand_soilgrid.png
Figures/Triangle.Soil.png
Figures/Worldmap.png
Figures/Worldmap2.png
Figures/all.maps.LAI.png
Figures/clay.png
Figures/clay_density.png
Figures/clay_details.png
Figures/clay_high.png
Figures/clay_sand_dis.png
Figures/density.Avitabile.png
Figures/density.SoilGrids.png
Figures/density.SoilGrids_model.png
Figures/density.plot.png
Figures/fsw.png
Figures/fsw_agb.png
Figures/fsw_agb_CH.png
Figures/hydro_prop.png
Figures/hydro_prop_ksat.png
Figures/inter.vs.intra.png
Figures/legendLPJ-GUESS.png
Figures/map.BP.png
Figures/map.Bokxplot.png
Figures/map.Boxplot.png
Figures/map.Boxplot2.png
Figures/map.SoilGrids.png
Figures/map.model.png
Figures/map_clay.png
Figures/maps.plot.png
Figures/maps.plot2.png
Figures/maps.plot_spinup.png
Figures/modelvsmodel.png
Figures/plot.Density.png
Figures/plot.PFT.png
Figures/ratio.png
Figures/sand.png
Figures/site.var.png
Figures/soil.density.png
Figures/triangleSoil.png
Manuscript/Frontiers special issue abstract.docx
Manuscript/questions_performance_review.docx
NAMESPACE
R/K_h.R R/Psi_theta.R R/Psi_theta_ORC.R R/Se.R R/aggregates.R R/components2ntext_soil.R R/components2ntext_soil_single.R R/dissaggregates.R R/download.soilGrid.psims.R R/get_mode.R R/get_soilproperties.R R/k_theta.R R/k_theta_ORC.R R/ntext_soil2components.R R/rotate.R R/theta_Psi.R R/theta_h.R
SoilSensitivity.Rproj
job.sh
man/hello.Rd
maps/.Rhistory
maps/1901JAN.h5
maps/HWSD_all.grd
maps/HWSD_all.gri
maps/ORCHIDEE_nc/soils_param_Max_halfdeg.nc
maps/ORCHIDEE_nc/soils_param_Mean_halfdeg.nc
maps/ORCHIDEE_nc/soils_param_Min_halfdeg.nc
maps/land.RDS
maps/land_IC.RDS
maps/landmask.RDS
maps/soilgrid.grd
maps/soilgrid_all.grd
maps/soilgrid_all.gri
maps/soilgrid_soc.grd
maps/soilgrid_sub.clay.grd
maps/soilgrid_sub.clay.gri
maps/soilgrid_sub.grd
maps/soilgrid_sub.gri
maps/soilgrid_sub.sand.grd
maps/soilgrid_sub.sand.gri
maps/soilgrid_top.clay.grd
maps/soilgrid_top.clay.gri
maps/soilgrid_top.clay_max.grd
maps/soilgrid_top.clay_max.gri
maps/soilgrid_top.clay_max_resampled.grd
maps/soilgrid_top.clay_max_resampled.gri
maps/soilgrid_top.clay_mean.grd
maps/soilgrid_top.clay_mean.gri
maps/soilgrid_top.clay_mean_resampled.grd
maps/soilgrid_top.clay_mean_resampled.gri
maps/soilgrid_top.clay_min.grd
maps/soilgrid_top.clay_min.gri
maps/soilgrid_top.clay_min_resampled.grd
maps/soilgrid_top.clay_min_resampled.gri
maps/soilgrid_top.grd
maps/soilgrid_top.gri
maps/soilgrid_top.sand.grd
maps/soilgrid_top.sand.gri
maps/soilgrid_top.sand_max.grd
maps/soilgrid_top.sand_max.gri
maps/soilgrid_top.sand_max_resampled.grd
maps/soilgrid_top.sand_max_resampled.gri
maps/soilgrid_top.sand_mean.grd
maps/soilgrid_top.sand_mean.gri
maps/soilgrid_top.sand_mean_resampled.grd
maps/soilgrid_top.sand_mean_resampled.gri
maps/soilgrid_top.sand_min.grd
maps/soilgrid_top.sand_min.gri
maps/soilgrid_top.sand_min_resampled.grd
maps/soilgrid_top.sand_min_resampled.gri
maps/soilgrid_top.soc_max.grd
maps/soilgrid_top.soc_max.gri
maps/soilgrid_top.soc_max_resampled.grd
maps/soilgrid_top.soc_max_resampled.gri
maps/soilgrid_top.soc_mean.grd
maps/soilgrid_top.soc_mean.gri
maps/soilgrid_top.soc_mean_resampled.grd
maps/soilgrid_top.soc_mean_resampled.gri
maps/soilgrid_top.soc_min.grd
maps/soilgrid_top.soc_min.gri
maps/soilgrid_top.soc_min_resampled.grd
maps/soilgrid_top.soc_min_resampled.gri
outputs/df_SoilSens.RDS
outputs/history-S-1903-01-01-000000-g01.h5
outputs/history-S-1904-01-01-000000-g01.h5
outputs/history-S-1920-01-01-000000-g01.h5
outputs/history-S-1950-01-01-000000-g01.h5
outputs/history-S-1999-01-01-000000-g01.h5
outputs/history-S-2000-01-01-000000-g01.h5
outputs/status.all.RDS
scripts/AGB.map.historical.R scripts/Check.status.R scripts/Check.status.old.R scripts/Crash_LPJ.R scripts/Download.CRUNCEP.R scripts/Download.soilGrid.R scripts/Download.soilGrid.ocs.R scripts/Download.soilGrid.soc.R scripts/Figure_MAT.MAP.R scripts/Figure_PFTsplit.R scripts/Figure_SoilC.R scripts/Figure_TRENDY.R scripts/Figure_changeGPP.soiltype.R scripts/Figure_clay_SoilGrids.R scripts/Figure_clay_details.R scripts/Figure_cormat.R scripts/Figure_results.R scripts/Figure_sm.stress.R scripts/Figure_soilTriangle.R scripts/Figure_tropics.R scripts/Figure_variability_outputs.R scripts/Figures_historical.R scripts/Maps.Hydraulic.R scripts/ORCHIDEE_soilmap.R scripts/Soilmap.ORCHIDEE.conversion.R scripts/analyze.OP.all.models.R scripts/analyze_OP_LPJ.R scripts/analyze_OP_ORCHIDEE.R scripts/analyze_OP_PFT_LPJ.R scripts/analyze_OP_PFT_ORC.R scripts/analyze_SoilSens.R scripts/analyze_SoilSens_SG.R scripts/analyze_dynamics_SoilSens_SG.R scripts/analyze_dynamics_SoilSens_analysis.R scripts/analyze_dynamics_SoilSens_analysis_PFT.R scripts/analyze_patch_SoilSens_analysis.R scripts/check.finished.runs.analysis.R scripts/check_singleOP.R scripts/clean.run.direct.R scripts/convert_CRUNCEP.grid.R scripts/create_scenario_map.R scripts/create_scenario_map_soc.R scripts/debug_LPJ.R scripts/delete.runs.R scripts/delete_some_files.R scripts/draw_map_ORCHIDEE.R scripts/draw_maps.R scripts/draw_maps_LPJ.R scripts/draw_maps_ORC.R scripts/draw_status.R scripts/explore_FAO.R scripts/explore_HWSD.R scripts/explore_Soilfunctions_ED2.R scripts/explore_Soilfunctions_ORCHIDEE.R scripts/generate_SoilSens_test.R scripts/generate_SoilSens_test_SG.R scripts/generate_SoilSens_test_SG_IC.R scripts/generate_landmask_from_CRUNCEP.R scripts/impact.maps.soil.hydro.R scripts/inter.vs.intra.site.variability.R scripts/invert_lat_coordinates_CRUNCEP.R scripts/kill.runs.R scripts/merge.Outputs.R scripts/move_history_files.R scripts/plot_OP.R scripts/plot_dyn.R scripts/plot_map_texture.R scripts/rerun_notfinishedruns.R scripts/resample_soilmaps.R scripts/rescale_soilgrids.R scripts/restart_SoilSens.R scripts/restart_analysis_file.R scripts/restart_history_runs.R scripts/restart_history_unfinished_runs.R
femeunier/SoilSensitivity documentation built on March 30, 2022, 10:23 a.m.