batch_mitofish_to_csv: Batch process MitoFish output

In fishsciences/metabarcode_utils: Meta-barcoding Utilities

Batch process MitoFish output

Description

These functions allow for batch processing MitoFish output. Each takes a directory full of files.

Usage

batch_mitofish_to_csv(file_dir, out_dir, ...)

batch_csv_to_fasta(csv_dir, out_dir, ...)

Arguments

file_dir	character, the file path to the directory containing input files.
out_dir	character, the file path to the output directory to write files to. If the directory does not exist, it will be created.
...	additional args passed to the processing function

Value

list of processed output, in the case of mito_to_csv, or the file path to the written files, in the case of csv_to_fasta

Author(s)

Matt Espe

fishsciences/metabarcode_utils documentation built on Feb. 25, 2024, 11:31 a.m.