mitofish_to_csv: Mitofish to CSV

In fishsciences/metabarcode_utils: Meta-barcoding Utilities

Mitofish to CSV

Description

Converts from a mitofish XLSX file to two CSVs. The hit CSV contains with one row per hit, with the sample name designating the stregth of the hit. The nohit CSV contains just the sequence of number of hits

Usage

mitofish_to_csv(file, outfile = basename(file), outdir = ".")

Arguments

file	file path to the xlsx file output from mitofish
outfile	basename for output files, defaults to the name of the input file
outdir	directory to write CSVs to. Defaults to current working directory

Value

list, with a data.frame of hits and a data.frame for nohits

Author(s)

Matt Espe

fishsciences/metabarcode_utils documentation built on Feb. 25, 2024, 11:31 a.m.