binomial: Calculate the co-dependency index

Description Usage Arguments Value

View source: R/binomial.R

Description

Calculate P-values from the binomial distribution and take their negative logarithms as an indicator of coexpression, as proposed by Mohammadi et al. in doi: 10.1101/241646.

Usage

1
binomial(mat)

Arguments

mat

a matrix of data, with samples in rows and features in columns

Value

the binomial P-values between non-zero/missing values in each pair of columns


fosterlab/CFTK documentation built on Jan. 19, 2021, 10:31 p.m.